Extreme Prenatal Genetic Testing

image

…Our testing has gotten a bit more advanced since the last time you two were in here. Would you like to know more about your embryo? …Would you like to know her sexual orientation?

O.K.

Ruby is heterosexual.

Phew. I mean, I have neutral feelings about this. I mean, obviously, I have no issues with—

Shhh. This is a safe zone. Ruby is definitively heterosexual, but she will experiment on and off in college and shortly thereafter. These experiments will be motivated by her emo-ish boyfriend, Lucas Adler-Zeitz, who is currently a Grade B embryo just a few drawers down from her.

A Grade B? Couldn’t Ruby do better?

Oh, she will. She’s going to marry Robert Westinghouse, who I believe is about to turn fifteen.

Wow. That’s a big age difference.

Well, she’s going to be “that kind of girl.” Ooh, this is quite positive. On the tenth chromosome here, she has a high H.S.C. factor.

What’s H.S.C.?

High-school-cool factor. By tenth grade, she’ll be making fun of the loser girl who still draws horses and smells like soup, instead of being the one who’s made fun of herself.

I’m not so sure how I feel about that.

Yes, you are.

Fine. We’re relieved.

Any other questions?

If I may… never mind.

You can ask.

This is embarrassing.

She’s going to Penn.

Oh. O.K.

It’s an Ivy.

Yeah, but it’s the Ivy about which people have to say “it’s an Ivy” afterward.

Well, if it makes you feel any better, she’s going to get into Harvard. But she’s going to choose Penn.

That’s insane. We’ll see about that.

Sure you will…

Continue reading: http://nyr.kr/13r38Z2

How a $1,000 test could destroy the health-insurance industry

washingtonpost.com

The New York Times reports that the cost of sequencing an individual genome will soon be less than $1,000. That’s not nothing, but given what most health care costs, it’s not much. And it means that an individual mandate — or something much like it — is inevitable.

In 2008, Congress overwhelmingly passed, and President George W. Bush signed, the Genetic Information Nondiscrimination Act. Ron Paul was the lone dissenter. The legislation bars insurers from denying coverage or raising premiums on individuals who show a genetic predisposition toward particular diseases. And in doing, it armed a time bomb beneath the health-care industry.

[…]

The policy that solves this problem is an individual mandate, or Medicare-for-All, or some other approach that forces the healthy to insure themselves alongside the sick. In its absence, there’s no way to make a risk-selection model work for the health insurance industry, as consumers will be armed with detailed information about their health risks that insurers are legally prohibited from pricing into their insurance premiums.

Roundup: Birth Defects Caused By World's Top-Selling Weedkiller, Scientists Say

Lucia Graves
Huffington Post

First Posted: 06/24/11 09:04 AM ET Updated: 06/24/11 01:07 PM ET

WASHINGTON — The chemical at the heart of the planet’s most widely used herbicide — Roundup weedkiller, used in farms and gardens across the U.S. — is coming under more intense scrutiny following the release of a new report calling for a heightened regulatory response around its use.

Critics have argued for decades that glyphosate, the active ingredient in Roundup and other herbicides used around the globe, poses a serious threat to public health. Industry regulators, however, appear to have consistently overlooked their concerns.

A comprehensive review of existing data released this month by Earth Open Source, an organization that uses open-source collaboration to advance sustainable food production, suggests that industry regulators in Europe have known for years that glyphosate, originally introduced by American agricultural biotechnology giant Monsanto in 1976, causes birth defects in the embryos of laboratory animals.

Founded in 2009, Earth Open Source is a non-profit organisation incorporated in the U.K. but international in scope. Its three directors, specializing in businesstechnology and genetic engineering, work pro-bono along with a handful of young volunteers. Partnering with half a dozen international scientists and researchers, the group drew its conclusions in part from studies conducted in a number of locations, including ArgentinaBrazilFranceand the United States.

Earth Open Source’s study is only the latest report to question the safety of glyphosate, which is the top-ranked herbicide used in the United States. Exact figures are hard to come by because the U.S. Department of Agriculture stopped updating its pesticide use database in 2008. The EPA estimates that the agricultural market used 180 to 185 million pounds of glyphosate between 2006 and 2007, while the non-agricultural market used 8 to 11 million pounds between 2005 and 2007, according to its Pesticide Industry Sales & Usage Report for 2006-2007 published in February, 2011.

The Earth Open Source study also reports that by 1993 the herbicide industry, including Monsanto, knew that visceral anomalies such as dilation of the heart could occur in rabbits at low and medium-sized doses. The report further suggests that since 2002, regulators with the European Commission have known that glyphosate causes developmental malformations in lab animals.

Even so, the commission’s health and consumer division published a final review report of glyphosate in 2002 that approved its use in Europe for the next 10 years.

As recently as last year, the German Federal Office for Consumer Protection and Food Safety (BLV), a government agency conducting a review of glyphosate, told the European Commission that there was no evidence the compound causes birth defects, according to the report.

The agency reached that conclusion despite almost half a dozen industry studies that found glyphosate produced fetal malformations in lab animals, as well as an independent study from 2007 that found that Roundup induces adverse reproductive effects in the male offspring of a certain kind of rats.

German regulators declined to respond in detail for this story because they say they only learned of the Earth Open Source report last week. The regulators emphasized that their findings were based on public research and literature.

Although the European Commission originally planned to review glyphosate in 2012, it decided late last year not to do so until 2015. And it won’t review the chemical under more stringent, up-to-date standards until 2030, according to the report.

The European Commission told HuffPost that it wouldn’t comment on whether it was already aware of studies demonstrating the toxicity of glyphosate in 2002. But it said the commission was aware of the Earth Open Source study and had discussed it with member states.

“Germany concluded that study does not change the current safety assessment of gylphosate,” a commission official told HuffPost in an email. “This view is shared by all other member states.”

John Fagan, a doctor of molecular and cell biology and biochemistry and one of the founders of Earth Open Source, acknowledged his group’s report offers no new laboratory research. Rather, he said the objective was for scientists to compile and evaluate the existing evidence and critique the regulatory response.

“We did not do the actual basic research ourselves,” said Fagan. “The purpose of this paper was to bring together and to critically evaluate all the evidence around the safety of glyphosate and we also considered how the regulators, particularly in Europe, have looked at that.”

For its part, Earth Open Source said that government approval of the ubiquitous herbicide has been rash and problematic.

“Our examination of the evidence leads us to the conclusion that the current approval of glyphosate and Roundup is deeply flawed and unreliable,” wrote the report’s authors. “What is more, we have learned from experts familiar with pesticide assessments and approvals that the case of glyphosate is not unusual.

“They say that the approvals of numerous pesticides rest on data and risk assessments that are just as scientifically flawed, if not more so,” the authors added. “This is all the more reason why the Commission must urgently review glyphosate and other pesticides according to the most rigorous and up-to-date standards.”

Monsanto spokeswoman Janice Person said in a statement that the Earth Open Source report presents no new findings.

“Based on our initial review, the Earth Open Source report does not appear to contain any new health or toxicological evidence regarding glyphosate,” Person said.

“Regulatory authorities and independent experts around the world agree that glyphosate does not cause adverse reproductive effects in adult animals or birth defects in offspring of these adults exposed to glyphosate,” she said, “even at doses far higher than relevant environmental or occupational exposures.”

While Roundup has been associated with deformities in a host of laboratory animals, its impact on humans remains unclear. One laboratory study done in France in 2005 found that Roundup and glyphosate caused the death of human placental cells and abnormal embryonic cells. Another study, conducted in 2009, found that Roundup caused total cell death in human umbilical, embryonic and placental cells within 24 hours. Yet researchers have conducted few follow-up studies.

“Obviously there’s a limit to what’s appropriate in terms of testing poison on humans,” said Jeffrey Smith, executive director of the Institute for Responsible Technology, which advocates for genetically modified food. “But if you look at the line of converging evidence, it points to a serious problem. And if you look at the animal feeding studies with genetically modified Roundup ready crops, there’s a consistent theme of reproductive disorders, which we don’t know the cause for because follow-up studies have not been done.”

“More independent research is needed to evaluate the toxicity of Roundup and glyphosate,” he added, “and the evidence that has already accumulated is sufficient to raise a red flag.”

Authorities have criticized Monsanto in the past for soft-peddling Roundup. In 1996 New York State’s Attorney General sued Monsanto for describing Roundup as “environmentally friendly” and “safe as table salt.” Monsanto, while not admitting any wrongdoing, agreed to stop using the terms for promotional purposes and paid New York state $250,000 to settle the suit.

Regulators in the United States have said they are aware of the concerns surrounding glyphosate. The Environmental Protection Agency, which is required to reassess the safety and effectiveness all pesticides on a 15-year cycle through a process called registration review, is currently examining the compound.

“EPA initiated registration review of glyphosate in July 2009,” the EPA told HuffPost in a written statement. “EPA will determine if our previous assessments of this chemical need to be revised based on the results of this review. EPA issued a notice to the company [Monsanto] to submit human health and ecotoxicity data in September 2010.”

The EPA said it will also review a “wide range of information and data from other independent researchers” including Earth Open Source.

The agency’s Office of Pesticide Programs is in charge of the review and has set a deadline of 2015 for determining if registration modifications need to be made or if the herbicide should continue to be sold at all.

Though skirmishes over the regulation of glyphosate are playing out at agencies across the U.S. and around the world, Argentina is at the forefront of the battle.

THE ARGENTINE MODEL

The new report, “Roundup and birth defects: Is the public being kept in the dark?” comes years after Argentine scientists and residents targeted glyphosate, arguing that it caused health problems and environmental damage.

Farmers and others in Argentina used the weedkiller primarily on genetically modified Roundup Ready soy, which covers nearly 50 million acres, or half of the country’s cultivated land area. In 2009 farmers sprayed that acreage with an estimated 200 million liters of glyphosate.

The Argentine government helped pull the country out of a recession in the 1990s in part by promoting genetically modified soy. Though it was something of a miracle for poor farmers, several years after the first big harvests residents near where the soy cop grew began reporting health problems, including high rates ofbirth defects and cancers, as well as the losses of crops and livestock as the herbicide spray drifted across the countryside.

Such reports gained further traction after an Argentine government scientist, Andres Carrasco conducted a study, “Glyphosate-Based Herbicides Produce Teratogenic Effects on Vertebrates by Impairing Retinoic Acid Signaling” in 2009.

The study, published in the journal Chemical Research in Toxicology in 2010, found that glyphosate causes malformations in frog and chicken embryos at doses far lower than those used in agricultural spraying. It also found that malformations caused in frog and chicken embryos by Roundup and its active ingredient glyphosate were similar to human birth defects found in genetically modified soy-producing regions.

“The findings in the lab are compatible with malformations observed in humans exposed to glyphosate during pregnancy,” wrote Carrasco, director of the Laboratory of Molecular Embryology at the University of Buenos Aires. “I suspect the toxicity classification of glyphosate is too low.”

“In some cases this can be a powerful poison,” he concluded.

Argentina has not made any federal reforms based on this research and has not discussed the research publicly, Carrasco told HuffPost, except to mount a “close defense of Monsanto and it partners.”

The Ministry of Science and Technology has moved to distance the government from the study, telling media at the time the study was not commissioned by the government and had not been reviewed by scientific peers.

Ignacio Duelo, spokesman for the the Ministry of Science and Technology’s National Council for Scientific and Technical Research [CONICET], told HuffPost in an statement that while Carrasco is one of its researchers, CONICET has not vouched for or assessed his work.

Duelo said that the Ministry of Science is examining Carrasco’s report as part of a study of the possible harmful effects of the glyphosate. Officials, he added, are as yet unable to “reach a definitive conclusion on the effects of glyphosate on human health, though more studies are recommended, as more data is necessary.”

REGIONAL BANS

After Carrasco announced his findings in 2009, the Defense Ministry banned planting of genetically modified glyphosate-resistant soy on lands it rents to farmers, and a group of environmental lawyers petitioned the Supreme Court of Argentina to implement a national ban on the use of glyphosate, including Monsanto’s Roundup product. But the ban was never adopted.

“A ban, if approved, would mean we couldn’t do agriculture in Argentina,” said Guillermo Cal, executive director of CASAFE, Argentina’s association of fertilizer companies, in a statement at the time.

In March 2010, a regional court in Argentina’s Santa Fe province banned the spraying of glyphosate and other herbicides near populated areas. A month later, the provincial government of Chaco province issued a report on health statistics from La Leonesa. The report, which was carried in the leftist Argentinian newspaper Página 12, showed that from 2000 to 2009, following the expansion of genetically-modified soy and rice crops in the region, the childhood cancer rate tripled in La Leonesa and the rate of birth defects increased nearly fourfold over the entire province.

MORE QUESTIONS

Back in the United States, Don Huber, an emeritus professor of plant pathology at Purdue University, found that genetically-modified crops used in conjunction with Roundup contain a bacteria that may cause animal miscarriages.

After studying the bacteria, Huber wrote Secretary of Agriculture Tom Vilsack in February warning that the “pathogen appears to significantly impact the health of plants, animals, and probably human beings.”

The bacteria is particularly prevalent in corn and soybean crops stricken by disease, according to Huber, who asked Vilsack to stop deregulating Roundup Ready crops. Critics such as Huber are particularly wary of those crops because scientists have genetically altered them to be immune to Roundup — and thus allow farmers to spray the herbicide liberally onto a field, killing weeds but allowing the crop itself to continue growing.

Monsanto is not the only company making glyphosate. China sells glyphosate to Argentina at a very low price, Carrasco said, and there are more than one hundred commercial formulations in the market. But Monsanto’s Roundup has the longest list of critics, in part because it dominates the market.

The growth in adoption of genetically modified crops has exploded since their introduction in 1996. According to Monsanto, an estimated 89 percent of domestic soybean crops were Roundup Ready in 2010, and as of 2010, there were 77.4 million acres of Roundup Ready soybeans planted, according to the Department of Agriculture.

In his letter to the Agriculture Department, Huber also commented on the herbicide, saying that the bacteria that he’s concerned about appears to be connected to use of glyphosate, the key ingredient in Roundup.

“It is well-documented that glyphosate promotes soil pathogens and is already implicated with the increase of more than 40 plant diseases; it dismantles plant defenses by chelating vital nutrients; and it reduces the bioavailability of nutrients in feed, which in turn can cause animal disorders,” he wrote.

Huber said the Agriculture Department wrote him in early May and that he has had several contacts with the agency since then. But there’s little evidence that government officials have any intention of conducting the “multi-agency investigation” Huber requested.

Part of the problem may be that the USDA oversees genetically modified crops while the EPA watches herbicides, creating a potential regulatory loophole for products like Roundup, which relies on both to complete the system. When queried, USDA officials emphasized that they do not regulate pesticides or herbicides and declined to comment publicly on Huber’s letter.

A spokesman eventually conceded their scientists do study glyphosate. “USDA’s Agricultural Research Service’s research with glyphosate began shortly after the discovery of its herbicidal activity in the mid 1970s,” said the USDA in a statement. “All of our research has been made public and much has gone through the traditional peer review process.”

While Huber acknowledged his research is far from conclusive, he said regulatory agencies must seek answers now. “There is much research that needs to be done yet,” he said. “But we can’t afford to wait the three to five years for peer-reviewed papers.”

While Huber’s claims have roiled the agricultural world and the blogosphere alike, he has fueled skeptics by refusing to make his research public or identify his fellow researchers, who he claims could suffer substantial professional backlash from academic employers who received research funding from the biotechnology industry.

At Purdue University, six of Huber’s former colleagues pointedly distanced themselves from his findings, encouraging crop producers and agribusiness personnel “to speak with University Extension personnel before making changes in crop production practices that are based on sensationalist claims.”

Since it first introduced the chemical to the world in the 1970s, Monsanto has netted billions on its best-selling herbicide, though the company has faced stiffer competition since its patent expired in 2000 and it is reportedly working to revamp its strategy.

In a lengthy email, Person, the Monsanto spokeswoman, responded to critics, suggesting that the economic and environmental benefits of Roundup were being overlooked:

The authors of the report create an account of glyphosate toxicity from a selected set of scientific studies, while they ignored much of the comprehensive data establishing the safety of the product. Regulatory agencies around the world have concluded that glyphosate is not a reproductive toxin or teratogen (cause of birth defects) based on in-depth review of the comprehensive data sets available.

Earth Open Source authors take issue with the decision by the European Commission to place higher priority on reviewing other pesticide ingredients first under the new EU regulations, citing again the flawed studies as the rationale. While glyphosate and all other pesticide ingredients will be reviewed, the Commission has decided that glyphosate appropriately falls in a category that doesn’t warrant immediate attention.

“The data was there but the regulators were glossing over it,” said John Fagan of Earth Open Source, “and as a result it was accepted in ways that we consider really questionable.”

CORNERING THE INDUSTRY?

Although the EPA has said it wants to evaluate more evidence of glyphosate’s human health risk as part of a registration review program, the agency is not doing any studies of its own and is instead relying on outside data — much of which comes from the agricultural chemicals industry it seeks to regulate.

“EPA ensures that each registered pesticide continues to meet the highest standards of safety to protect human health and the environment,” the agency told HuffPost in a statement. “These standards have become stricter over the years as our ability to evaluate the potential effects of pesticides has increased. The Agency placed glyphosphate into registration review. Registration review makes sure that as the ability to assess risks and as new information becomes available, the Agency carefully considers the new information to ensure pesticides do not pose risks of concern to people or the environment.”

Agribusiness giants, including Monsanto, Dow Chemical, Syngenta and BASF, will generate much of the data the EPA is seeking as part of a 19-member task force. But the EPA has emphasized that the task force is only “one of numerous varied third-party sources that EPA will rely on for use in its registration review.”

The EPA is hardly the only industry regulator that relies heavily on data supplied by the agrochemical industry itself.

“The regulation of pesticides has been significantly skewed towards the manufacturers interests where state-of-the-art testing is not done and adverse findings are typically distorted or denied,” said Jeffrey Smith, of the Institute for Responsible Technology. “The regulators tend to use the company data rather than independent sources, and the company data we have found to be inappropriately rigged to force the conclusion of safety.”

“We have documented time and time again scientists who have been fired, stripped of responsibilities, denied funding, threatened, gagged and transferred as a result of the pressure put on them by the biotech industry,” he added.

Such suppression has sometimes grown violent, Smith noted. Last August, when Carrasco and his team of researchers went to give a talk in La Leonesa they wereintercepted by a mob of about a hundred people. The attack landed two people in the hospital and left Carrasco and a colleague cowering inside a locked car. Witnesses said the angry crowd had ties to powerful economic interests behind the local agro-industry and that police made little effort to interfere with the beating,according to the human rights group Amnesty International.

Fagan told HuffPost that among developmental biologists who are not beholden to the chemical industry or the biotechnology industry, there is strong recognition that Carrasco’s research is credible.

“For me as a scientist, one of the reasons I made the effort to do this research into the literature was to really satisfy the question myself as to where the reality of the situation lies,” he added. “Having thoroughly reviewed the literature on this, I feel very comfortable in standing behind the conclusions Professor Carrasco came to and the broader conclusions that we come to in our paper

“We can’t figure out how regulators could have come to the conclusions that they did if they were taking a balanced look at the science, even the science that was done by the chemical industry itself.”

My 23andme kit

has finally arrived in LA. In a few weeks, my DNA will prove that I stem from a long line of royal Jewish ancestry and that I’m more or less (72%, if you want numbers) the messiah.

Genetic Ancestry Testing



Genetic Ancestral Testing is wished among some in order to gather information about themselves and their “history”, wanting to understand the ‘who’, the ‘when’, the ‘how’ and the ‘why?’ the issue that arises with this, is that the commercial genetic tests that are available, are limited in what they can answer, and even then the answers can also be questionable, for each person may have hundreds of ancestors through the centuries and thousands through the millennia, etc., and taking into consideration the expectation that the genome will halve every generation, this then only allows for a small fraction of these ancestors to be documented.

The segmented genomes that are contributed by an ancestor are also not unique, so identifying a specific ancestor is always uncertain and statistical, this being said, it becomes even more so when individuals get tested at, or by, facilities, which have not been verified or tested. (licensed).

Accuracy of ancestry inference methods depend highly upon how the underlying patterns of the human genetic diversity are distributed among populations, and also how that diversity is surveyed, as in which genetic markers have been used and how, (also how many), also which populations are being used here as references and not forgetting the statistical methods that are being used in order to interpret these patterns of variation.

There has already been a show of data, which describes the geographic pattern of variation of these related lineages on the Y-chromosome and also MtDNA, therefore the possibility is there to identify groups of these, (Y chromosome and MtDNA), and also with high accuracy, but the population-level conclusion, has made uniparental systems much less accurate, the multi-locus data, like autosomal AIM’s, are much more accurate when dealing with estimations of total ancestry, but as always there are limitation to all tests, regardless.

Commercial scientists and private groups, will have a much better reference database, (unpublished), of populations available to them, in order to get better refined information, than those that are publicly available, but even these do not give you a complete sampling of human genetic diversity, they can not possibly get all the samples from all over the world, for many tribes out there, for instance have no outsider contact whatsoever.

True ancestral populations are not able to be represented, due to the lack of sampling from these true ancestral populations, this is why a proxy is merely used, one which is of a related population, like we see with the present-day West Africans, which are used in order to get conclusion of African American Ancestry, but the issue still remains when mixtures, African, Asians and even Europeans are underrepresented in ancestry testing databases.

The accuracy as mentioned before, relies on the nature in which the markers are used and also the statistical method that is used, because each marker varies in terms of its power and its information, and all methods will vary when making assumptions, so when dealing with a direct-to-consumer (DTC), company you receive no quality insurance and there is also no manner in which to control this market performance in the means of accuracy.

Genetic conclusions for a specific population is basically a statistical exercise, and will rarely give definitive results in this area, unless you’re trying to find a close relative or get a definite answer on a relation, so ancestry testing, really is still very uncertain.

Stanford students have shown an interest in genetic ancestry testing, proposing the use of HAPAA (HMM-based analysis of polymorphisms in admixed ancestries) and the study of the limitations surrounding the inference, using this as a function of the genetic similarity between ancestral populations and also the number of generations since the original admixture between these populations, which will ultimately give better accuracy for ancestry inference.

The theory is that this will allow for the reconstruction of the global migration and be able to pick out signals of historical events, including those not reflected in written records. (Sundquist, A. & Fratkin, E. et al.)

Another method found was one that is still in ‘patent pending’ form, where by the use of an interactive online network, genetic research and sampling could be done.
This invention is said to provide the user with DNA results, matching it to other DNA and also provide genealogical analysis.(freepatentsonline.com)

(The above patent sounds like what most of the DTC’s online gene databases offer the potential ‘client’)

The first step taken by most, DTC’s is to get you your results, this starts with a collection kit being sent to the individual, swabs are then to be collected from the inside of the mouth against the cheek, by the individual, where the buccal cells shall adhere to the swab.

The swab is then to be placed into a pre-addressed envelope and then gets sent to the lab.

Once the package arrives at the laboratory, the lab will start with isolating cells found on the swab, by the use of buffers, which suspend the cells in a solution.
Once isolation of the cells have been made, they are then purified, yet again, through a series of washes, where the cells are rotated at high speeds in a centrifuge, (centrifugation), once complete concentrated pellets are formed, these are again purified with buffers and repeated several times.

The DNA will then be extracted using a process called lysis, (this heats the cell membrane in order to break it open), the DNA will then release into the solution.
PCR amplification is then used to separate DNA strands at a very high heat, primers are then added to the reaction; these primers are specific for each Y-chromosome marker that is to be examined.

Once the primers anneal to the part of the DNA that is being examined, TAQ polymerase is used to duplicate the region of interest, and repeated in order to amplify Y-chromosome markers of interest.

Sequencing of the amplified DNA now starts with the amplified DNA being drawn up into a capillary, which contains a gel matrix, now depending on each marker the gel will ultimately migrate across at different rates, this allows for separation into bands, these bands give information on ancestral type markers, which are collected by a laser beam.

The information gathered here is placed into a computer, which will display series of peaks, each peak corresponds to one ancestral marker and the peak allows for the lab to determine features of ancestral markers, the data will then be converted into ancestral data, which will ultimately be generated into a final report indicating the “exact” ancestral marker type of the individual.

DTC companies, usually offer a variety of tests, like MtDNA tests, Y Line Tests or SNP Tests.

MtDNA tests will help with the linking family members from the female’s, (mother), side of the family.

This thought, is that one can trace all the way back to Mitochondrial Eve, where her descendants where the ones who ultimately populated the globe, evolving mutations in their mtDNA as they progressed, so the branching is now able to be read like a book.
This concept of the Mitochondrial Eve, is in a sense a mathematical fact, taking into account the number of women on earth today, ‘A’, then considering the mothers of these women alive today, ‘B’, one then sees that B will either be the same or less than A.
As one goes back in history B ultimately reduces, therefore one is left.
Y Line Tests are tests for establishing a family connection of the male line, for the Y chromosome being only passed from father to son, so here we once again find the theory that all Y-chromosomes track back to a single man, “Y chromosomal Adam”.
As mentioned with mtDNA, new Y types have been formed from the original Y-chromosome, as mutations have evolved naturally through the generations.

SNP tests are used to determine and individuals Haplogroup, where they are grouped with other individuals sharing the same genetic mutation, Scientists have assigned special letter number combination to these groups, A1 or K2, this is all useful when determining a geographical location of an individuals distant ancestry, also with distant cousins living in different locations.

Here we deal with ancient migration, where a natural mutation in the mtDNA allows the world’s population to be analyzed by scientists, the first expansion mtDNA sequences are still found today in the Khoi San, in Southern Africa and also the West pygmies in Central Africa.

These earliest groups haplogroups are known by scientists as ‘L1’ and ‘L0’, and all subsequent groups are also known by a letter, as mentioned above, a natural process of mutation formed haplogroup M and N, by groups moving out of Africa and also by their descendants, these where the groups that had gained a foothold during the Ice Age in Asia, Australia and also parts of Europe, these then evolved into their own specific types.

Haplogroups populating Europe are H, I, J, K, T, U, V, W and X, Asia shows haplogroups A, B, C, D, E, F, G, M, and Y and the Americans by an Asian branch with A, B, C, D and X, whereas Papua New Guinea by P and Q and then Australia by further M and N types.
Every person falls into a haplogroup, and each with it’s own story of its role in the population of the world, helping give clarity to the study of prehistoric migration. (CambridgeDNA.com)

The following are actual tests results for individuals, one result being an mtDNA test result and the other result being a DNAPrint test result.


“Mitochondria DNA (mtDNA) Test Results:
Shane Lee hamrick
Website: http://www.myfamily.com/site/55170579/
Date-Time: Wednesday, February 18, 2009 at 13:52:17 (CST)
Testing Company Used: Sorenson Molecular Genealogy Foundation
Date MtDNA Test Was Ordered: January 8, 2007
Date MtDNA Test Final Results Received: January 15, 2009
MtDNA Haplogroup: J
HVR1 MtDNA Results: 16069,16126,16519,
HVR2 MtDNA Test Results: 73,185,263,295,309.1,315.1,462,489
FST MtDNA Coding Region (CR) Test Results: 16069 16126 16519 73 185 263 295 309.1 315.1 462 489” (Kerchner.com 2009)


“DNAPrint Test Results:
Robert Rodriguez
Date-Time: Tuesday, November 11, 2008 at 20:01:03 (CST)
My Expected Results for IE,EA,NA,SSAF Population Groups: 0,0,0 0
My Actual DNAPrint Results for IE,EA,NA,SSAF Population Groups: 53,0,43,5
DNAPrint Test and/or Euro add-on Test Version Number: 2.5
Date DNAPrint Test and/or Euro add-on Test Was Ordered: 16 july 2009
Comments: Y-DNA is e1b1b, east and north africa, middle east,europe,western asia,(ethiopian,somalis,eritean,berbers) mtdna is L3e2b,africa.grew as mexican family history not certain, mother information her family history is that are from new mexico. father at least, 3 generations in california u.s.a. either of my mother or father,never mention africa history, only heard from, both of then mexican and native american connections.”(Kerchner.com 2008)

 

Original Article

CVS, Amniocentesis and NTS testing?

I’m going in on friday for my 8 week 3 day appointment and from there I will make my 12 week appointment and need to decide if I’m going to make an appointment for extra genetic testing. Did any of you have a Nuchal Translucency Screening (NTS), Chorionic Villus Sampling (CVS), or Amniocentesis? The NTS seems okay to me, but the other 2 have risks so I’m not really sure. What are your thoughts? Did any of you decide to have these tests? Did you decide against it? Any input is welcome!

Recycling

Crimson and Clover tussled over an apple slice as the children of B236 filed back into their classroom.

Mrs. Burger paged through the notes in her lesson plan and caught sight of Ricky Walters tapping on the guinea pigs’ aquarium tank.

She handed him a hall pass. “We’re going over the genetics unit this afternoon. Your family had concerns about the content, so you’ll be doing a guided study with Mr. Zimmer.”

Ricky winced. Mr Zimmer was in charge of the special education kids. He smelled like corn nuts.

“They’re in the library activity room today. Don’t forget to take your book bag!”

As Ricky closed the door, Mrs. Burger stepped to the front of the room.

“Everyone… eyes here, please”

Thirty-six eyes redirected their gaze to Ms. Burger. (Virginia was wearing an eye patch, but one presumes the hidden eye followed orders in the darkness.)

“How many of you remember Friar Mendel’s peas? Hands please!”

She scanned the room. Twelve… no… thirteen hands. Markus was digging in his nose again.

“Zooey… you raised your hand. Can you tell the class about Friar Mendel and his peas?”

“Friar Mendel had a garden and he planted peas and his peas were smooth peas and wrinkled peas and then they had babies and they were smooth but the babies of the babies were wrinkled but only sometimes.”

“That’s right. He cross-pollinated smooth yellow peas with wrinkly green peas. The offspring were smooth, yellow peas. The generation after that were mostly smooth and yellow, but some were green or wrinkly. And we learned about dominant genes, recessive genes, inheritance, and DNA, didn’t we, Emma?”

Emma dropped her pencil and looked up from her doodle. “Yes, ma’am.”

“So today we’re going to look at the results of your DNA tests. Your parents can access the data and the study guides online when you get home tonight. What we’re going to look at today is the fifth-grade edition. You’ll learn even more when you get to your seventh and ninth grade coursework.”

She paused. “I want to stress that these are your results. They’re about you and your heritage, so you shouldn’t feel the need to share them with anyone else if you don’t want to. Now come up and take your envelope as I call your name. Grete Anders, Dora Aviv, Paul Baker, Gavin Britton…”

She passed bright white envelopes, fat with folded booklets, into eager fingers. The room filled with the noise of ripping paper. One of the guinea pigs trilled a bubbly rhythm.

“Everyone turn to page five in the booklet, please.”

“Mrs. Burger! The book says I’m made of salmon!” shouted Andres.

Steven pointed at his booklet, “Look, Mrs. Burger! I’m made of pine trees!”

“I’m point zero zero zero five percent jellyfish!” whined Whitney.

“Eeeew! It says I’m mostly bugs and bacteria!” yowled Emma.

In moments classroom was in an uproar. Mrs. Burger whipped back the clamor with a quick chirp from her tin whistle.

“Please note, page four is a list of global soil composition comparisons. It’s scientific guesswork based on the carbon in the food and soil where you grew up, and it’s not what we’re going to be talking about today. And Emma, every one of us is made of bugs and bacteria. Now if you’ll turn to page five, we’ll meet the Neanderthals, the Denisovans…”

Emma crossed her arms. Her lip trembled. “But I don’t want to be made of bacteria.” She looked up at Mrs. Burger with glassy eyes.

Mrs. Burger leaned down near the girl’s desk. “What would you prefer to be made of?”

“I… don’t… know.” She crossed her arms and squeezed her eyes shut.

“Do you like stars?”

Emma’s pigtails bounced as she nodded.

“And what if I told you you’re really made of stars. Would you like that?”

Emma opened her eyes and looked at Mrs. Burger with suspicion. “That’s not what it says in the book.”

“That’s because the book starts counting later than I do.”

“I’m made of stars and bacteria?”

“You are, Emma. And so am I. And so is Whitney and Michael and Andres and Zooey and Duncan and Dora and Paul—”

“Mrs. Burger?” Gavin pointed at four dark eyes watching through aquarium glass. “What about the guinea pigs?”

“Yes, guinea pigs, too. We are all made of stars. But that… is for the astronomy chapter.” She returned to the board at the front of the room.

“Today, we’re all going to turn to page five to meet the hominids.”

23andme: Genetics just got personal.

23andme.com

With my tax refund I’m going to get my genetics tested. They just dropped their prices from $499 to $199. Awesome.

  So today I’m getting what is called a zyto scan. Basically what you do is you put your hand on a cradle that you hook up to a computer and over the internet it goes to a doctor and gives you information on what is going on in your body. It scans your whole body and tells you what’s up. Now I know that sounds kind of fishy. But here is why we are still doing it. Number one: My doctor’s son did it and they found a tape worm that they’d never of found and was making him very sick. And two: When you are as sick as I am for as long as I am you will do WHATEVER had even a slight chance of helping. I’m really hoping it finds something. Why do I wish I have something else? Because it’s something else we could be working on that could get me better. 

  Also today I’m getting results back of some genetic testing. They basically looked at maybe not all but a lot of my genes and they’ll tell us some stuff I should be taking and what I should be staying away from. 

I’ll let you guys know what happens. Please put out good vibes that we’ll find something easily fixable!

Genetic Testing, yes/no?

When I went for my blood transfusion on Friday my nurse & I had a long conversation about genetic testing. I told her that I already know the baby won’t have Sickle Cell cause my boyfriend was screened for it and has nothing, not even the trait; which leaves the baby with 100% chance of just having the trait between the two of us — better than the full blown disease as there are no complications with the trait except passing it on in the future. Since we know the outcome for Sickle Cell, my nurse begged me not to do any additional risky screening while pregnant; meaning no amniocentesis, nor cvs. I’m already a high risk pregnancy so I wouldn’t want to chance it but part of me wants to know everything about the baby (as every mother would.) I told her I’d wait to see the results of the nuchal scan, possibly next week, and proceed from there. She said that was fair enough and wished me luck, lots of love, & many blessings. (Side note: I love how people are already concerned for the baby. It gets sooo much love & support from almost everyone who knows, even people who don’t exactly know me too well.. *end of sappy moment*) I was just curious though as to how many moms plan to do testing or have done testing, & why or why not

Loading more posts...